Chris -
Few timberframes are air or kiln dried since the green wood is easier to work with and it's expensive to dry. Those who buy dried frames usually have a good bit of money to spare.
Even pine, doug fir, hemlock and red oak will check and twist. I have not read any testimonials of this happening before with a timberframe/SIP combination.
candyo - Go to
http://www.tfguild.orgHere you will find a wealth of knowledgable people that do nothing but talk timber frames. You will likely get some help there. If you can, please post some pictures of the frame and the panel problems.